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a tool for inferring species tree from sequencing reads
Python 160 19
Infers a phylogenetic tree from protein structures
Jupyter Notebook 104 18
FastOMA is a scalable software package to infer orthology relationship.
Python 96 17
Python 92 7
Infering ancestral synteny with hierarchical orthologous groups
Python 38 4
Phylo.IO JS tree viewer
JavaScript 36 12
OMAmer - tree-driven and alignment-free protein assignment to sub-families
Nextflow pipeline to convert OMA to OMA browser
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Phylogenetic profiling with orthology data
Automatic benchmarking of Fastoma over time
Python library to interact with OMA hdf5 files
foldtree2
using ESM2 to translate amino acids to 3di sequences to create foldseek
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